The meta-omics “metro map” sets out how these pipelines could chain
together — a roadmap of intended synergy rather than a set of guarantees. This page tracks
the work of walking it end to end on real data: what each pipeline needs as input, which handoffs
we have exercised so far, and where a bridge is still needed. Bridges become converter scripts and
upstream feature requests. A real dataset’s sequencing runs travel the belt as far as the
evidence goes — today, one hop.
Could not load data.json.
This page reads its data over fetch(), which browsers block on file://.
Serve the folder instead: python3 -m http.server -d docs 8080 then open
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…
Stations
Pipeline
Release
State (this dataset)
In
Out
Note
Handoffs
Status text is copied verbatim from the validation table in
PLAN.md. Edges with no status do not appear in that table at all.
From
To
Status (PLAN.md)
Source
Carries
Note
Runs in this dataset
Accession
Strategy
Layer
Collection date
Study
Instrument
GB
Other dataset candidates
The SIG dataset decision is open. The gate is
amplicon + shotgun metagenome + shotgun metatranscriptome; these are not selectable here because no
runs have been prepared for them.